Blast2GO Maps BLAST results to GO annotation terms

功能简介

分析模块,输入XML格式的NR库BLAST比对结果,输出GO注释结果。

It takes as input BLAST XML results against a protein database, typicallythe NCBI non-redundant (NR) database. This tool will accept concatenatedBLAST XML files (although they are technically invalid XML), which is veryuseful if you have sub-divided your protein FASTA files and run BLAST onthem in batches.

The BLAST matches are used to assign Gene Ontology (GO) annotation termsto each query sequence.



输出格式

Column

Description

1

ID of query sequence

2

GO term

3

GO description


分析模块,引用了 b2g4pipe_v2.5 软件(http://www.blast2go.com/data/blast2go/b2g4pipe_v2.5.zip)


相关文献如下所示:

S. Götz et al. (2008).High-throughput functional annotation and data mining with the Blast2GO suite.Nucleic Acids Res. 36(10):3420–3435.

A. Conesa and S. Götz (2008).Blast2GO: A Comprehensive Suite for Functional Analysis in Plant Genomics.International Journal of Plant Genomics. 619832.

A. Conesa et al. (2005).Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research.Bioinformatics 21:3674-3676.