GO数据库注释
GO数据库注释

功能简介

分析模块,输入XML格式的NR库BLAST比对结果,输出GO注释结果。

It takes as input BLAST XML results against a protein database, typicallythe NCBI non-redundant (NR) database. This tool will accept concatenatedBLAST XML files (although they are technically invalid XML), which is veryuseful if you have sub-divided your protein FASTA files and run BLAST onthem in batches.

The BLAST matches are used to assign Gene Ontology (GO) annotation termsto each query sequence.


输出格式

ColumnDescription
1ID of query sequence
2GO term
3GO description

分析模块,引用了 b2g4pipe_v2.5 软件(http://www.blast2go.com/data/blast2go/b2g4pipe_v2.5.zip)

相关文献如下所示:

S. Götz et al. (2008).High-throughput functional annotation and data mining with the Blast2GO suite.Nucleic Acids Res. 36(10):3420–3435.

A. Conesa and S. Götz (2008).Blast2GO: A Comprehensive Suite for Functional Analysis in Plant Genomics.International Journal of Plant Genomics. 619832.

A. Conesa et al. (2005).Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research.Bioinformatics 21:3674-3676.