PCA analysis and plot PCA(主成分分析)
PCOA analysis and plot PCOA(主坐标分析)
3D Scatterplot(3D散点图)
Create Sample Correlation Matrix(样品相关性系数计算)
Generate distance matrix(距离矩阵计算)
Retrieve pairs in Matrix(得到矩阵数值满足条件的行列信息)
Make Distance HeatMap(距离矩阵热图)
Make Distance Boxplots(组间距离关系盒形图)
Make Density Plot(距离/相关性系数密度曲线)
Plot heatmap with tree(热图)
Plot hcluster tree(层次聚类树)
Plot Tree(画树状图)
Plot FPKM distribution for all samples(FPKM分布曲线)
FPKM Boxplot for all samples(FPKM盒形图)
FPKM Scatterplot for two samples(两样品间FPKM散点图)
FPKM Scatterplot for all pair-wise samples(两两样品FPKM散点图)
Matrix to gene plots(单个基因表达水平折线图)
Plot Venn Diagram(维恩图)
Subcluster Expression Analysis(子表模式、时序分析)
Plot Genes subClusters Network(子表达模式网络图)
Plot Gene Regulatory Network(基因调控网络图)